© Left Top: Sina Ettmer; Left bottom:Stockfotos-MG, Center: Johanna Berg; Rigth top:blende11.photo; Right bottom:Steffen Eichner

Program

Session 2: Integrative multi-omics, bioinformatics and modelling

Monday - Tuesday, June 22-23

Short Presentations

Multi-omics mining of dark microbial matter for synthetic biology and biotechnology: call for action to the metaproteomics community Pranas Grigaitis
Comprehensive evaluation of statistical approaches for differential metaproteomics Tjorven Hinzke( 1,2,3)*, Benoit Kunath (3,4,5), J. Alfredo Blakeley-Ruiz (3), Ayesha Awan (3), Abigail Korenek (3), Edeline Anthoniraj (3), Simina Vintila (3), Paul Wilmes (4,6), Manuel Kleiner (3)
Developing Community-Driven SDRF Metaproteomics Templates and User-Friendly Metadata Annotation via lesSDRF Tim Van Den Bossche (1,2,*), Pieter Verschaffelt (1,2,3,*), Tine Claeys (1,2), Lennart Martens (1,2), Bart Mesuere (3)
Help, UniProt changed!? Does Unipept still work? Tibo Vande Moortele, Pieter Verschaffelt, Simon Van de Vyver, Ben-Björn Binke, Peter Dawyndt, Bart Mesuere
TaxonLFQ: Rescuing the shared proteome for more accurate microbial quantification Kirill Lazarev(1,2), Tanja Holstein(3), Prof. Dr. Zoran Nikoloski(2) and Thilo Muth(1)
Ultrafast metaproteomics with DirectMS1 Elizaveta M. Kazakova, Mark V. Ivanov, Irina A. Tarasova, Mikhail V. Gorshkov
AI-powered design of increasingly simplified microbial communities Rajesh Kumar Bajiya1, 2, J. Armengaud1, L. Grenga1
MetaProteomeAnalyzer Cloud for Scalable Metaproteomics Analysis Robert Heyer1,2, Daniel Kautzner2, Ludwig Knoche1, Malte Böttcher2, Maximilian Wolf2, Kay Schallert1
From Prediction to Validation: An Integrated Multi-omic Approach to Identify Amyloidogenic Small Microbial Proteins in the Human Gut Júlia Ortís Sunyer, Luis F. Delgado, Megan E. Davin, Steven L. Tavis, Tuesday Lowndes, Zainab Zafar, Jordan Caussin, Rashi Halder, Cédric C. Laczny, Patrick May, Robert L. Hettich, Paul Wilmes
AutoRun: an automated pipeline for database-free metaproteomics Mayalen Berterretche, Karen Culotta, Virginie Jouffret, Olwen Simenel, Thibaut Dumas, Clément Lozano, Jean Armengaud, Lucia Grenga, Olivier Pible